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1 parent 8f15d3f commit bb63780Copy full SHA for bb63780
cmd/check-sort-order/main.go
@@ -58,7 +58,7 @@ func main() {
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if strings.HasSuffix(args.Path, ".vcf.gz") {
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checkVCF(args.Path, gf)
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- } else if strings.HasSuffix(args.Path, ".bed.gz") {
+ } else if strings.HasSuffix(args.Path, ".bed.gz") || strings.HasSuffix(strings.ToLower(args.Path), ".bedgraph.gz") {
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checkTab(args.Path, gf, get_vcf_chrom_start)
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} else {
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found := false
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