Skip to content

Comments

Apptainer installation in conda environment#54

Open
srosenbu wants to merge 3 commits intomainfrom
52-singularityapptainer
Open

Apptainer installation in conda environment#54
srosenbu wants to merge 3 commits intomainfrom
52-singularityapptainer

Conversation

@srosenbu
Copy link
Member

@srosenbu srosenbu commented Feb 4, 2026

Installation of apptainer now via the benchmark environment that also contains snakemake. No system-wide installation is needed anymore. Further, replace singularity in the snakefile with container because the name singularity is not used by the apptainer project anymore

@srosenbu srosenbu linked an issue Feb 4, 2026 that may be closed by this pull request
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

Singularity/apptainer

1 participant