gse2study

Run pipeline on the cluster

Name		Name	Last commit message	Last commit date
Latest commit History 160 Commits
04_deseq2		04_deseq2
geo_submission		geo_submission
01_preprocessing.sh		01_preprocessing.sh
02_stranded_or_not.Rmd		02_stranded_or_not.Rmd
03_build_rnaseq_study.Rmd		03_build_rnaseq_study.Rmd
05_blastn_analyse.Rmd		05_blastn_analyse.Rmd
06_absolute_expression_quantiles.Rmd		06_absolute_expression_quantiles.Rmd
07_rmsk.Rmd		07_rmsk.Rmd
08_rnkfile.R		08_rnkfile.R
09_boxplot.Rmd		09_boxplot.Rmd
10_heatmap		10_heatmap
10_material_and_methods.Rmd		10_material_and_methods.Rmd
99_s3aws.sh		99_s3aws.sh
README.md		README.md
codemeta.json		codemeta.json
conda_config.sh		conda_config.sh
config.hg19		config.hg19
config.hg38		config.hg38
config.mm10		config.mm10
config.rn5		config.rn5
config.rn6		config.rn6
config.sacCer3		config.sacCer3
config.t2t		config.t2t
design.R		design.R
globus_icm.sh		globus_icm.sh
wf.py		wf.py