Skip to content
@meringlab

Christian von Mering's lab

Popular repositories Loading

  1. FlashWeave.jl FlashWeave.jl Public

    Inference of microbial interaction networks from large-scale heterogeneous abundance data

    Julia 90 9

  2. MicrobeAtlasWebsite MicrobeAtlasWebsite Public

    8

  3. og_consistency_pipeline og_consistency_pipeline Public

    Consistency pipeline for hierarchies of orthologous groups (OGs) based on subsampling and tree reconciliation

    Python 5 3

  4. string-mcp string-mcp Public

    STRING MCP server

    Python 5 1

  5. Bio334 Bio334 Public

    Bio334 Public student repository

    Jupyter Notebook 4 10

  6. cellbase-docker cellbase-docker Public

    dockerised opencb/cellbase

    Perl 2 1

Repositories

Showing 10 of 24 repositories
  • MicrobeAtlas_companion Public

    Code and additional supplementary data for Rodrigues, Tackmann et al. (2025)

    meringlab/MicrobeAtlas_companion’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Jan 20, 2026
  • string-mcp Public

    STRING MCP server

    meringlab/string-mcp’s past year of commit activity
    Python 5 MIT 1 0 0 Updated Dec 11, 2025
  • paxdb-issues Public

    🧩 PaxDb Issues Welcome to the PaxDb Issue Tracker — the central place to report, discuss, and track issues related to PaxDb, the Protein Abundance Database.

    meringlab/paxdb-issues’s past year of commit activity
    0 0 1 0 Updated Nov 10, 2025
  • FlashWeave.jl Public

    Inference of microbial interaction networks from large-scale heterogeneous abundance data

    meringlab/FlashWeave.jl’s past year of commit activity
    Julia 90 9 10 (1 issue needs help) 0 Updated Oct 9, 2025
  • Bio334 Public

    Bio334 Public student repository

    meringlab/Bio334’s past year of commit activity
    Jupyter Notebook 4 10 0 0 Updated May 12, 2025
  • paxdb-data-pipeline Public
    meringlab/paxdb-data-pipeline’s past year of commit activity
    Python 0 0 4 0 Updated Jul 26, 2024
  • MAPseq Public Forked from jfmrod/MAPseq

    highthroughput rRNA sequence classification and OTU mapping for metagenomic samples

    meringlab/MAPseq’s past year of commit activity
    C 0 7 0 0 Updated Jun 7, 2024
  • MAPseq_clone Public
    meringlab/MAPseq_clone’s past year of commit activity
    C 0 0 0 0 Updated May 2, 2024
  • react-map-web Public
    meringlab/react-map-web’s past year of commit activity
    JavaScript 0 0 0 0 Updated Aug 3, 2023
  • paxdb-api Public

    abundance microservice

    meringlab/paxdb-api’s past year of commit activity
    JavaScript 0 0 1 15 Updated Jul 18, 2023
View all repositories

Most used topics

Loading…